Biomedical & Clinical Informatics Lab

Department of Computational Medicine & Bioinformatics

Publications

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2018
Li Z, Derksen H, Gryak J, Ghanbari H, Gunaratne P, Najarian K.  2018.  Atrial Fibrillation Prediction Using Recordings from Portable Devices. 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Farzaneh N, Soroushmehr SMR, Patel H, Wood A, Gryak J, Fessell D, Najarian K.  2018.  Automated Kidney Segmentation for Traumatic Injured Patients through Ensemble Learning and Active. 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Hooshmand M, Soroushmehr SMR, Williamson C, Gryak J, Najarian K.  2018.  Automatic Midline Shift Detection in Traumatic Brain Injury. 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Wood A, Soroushmehr SMR, Farzaneh N, Ward K, Fessell D, Gryak J, Najarian K.  2018.  Fully Automated Spleen Localization and Segmentation Using Machine Learning and 3D Active Contours. 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Wang L, Ansari S, Ward KR, Najarian K, Oldham KR.  2018.  Identification of Compensatory Arterial Dynamics in Swine Using a Non-Invasive Sensor for Local Vascular Resistance. Proceedings of the ASME Dynamic Systems and Control Conference ASME.
Shen R, Li Z, Zhang L, Hua Y, Mao M, Li Z, Cai Z, Qiu Y, Gryak J, Najarian K.  2018.  Osteosarcoma Patients Classification Using Plain X-Rays and Metabolomic Data. 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Wood A, Shpilrain V, Najarian K, Mostashari A, Kahrobaei D.  2018.  Private-Key Fully Homomorphic Encryption for Private Classification. Mathematical Software – ICMS 2018.
2017
Tavakoli N, Karimi M, Nejati M, Karimi N, Soroushmehr S.M.R, Samavi S, Najarian K.  2017.  Abnormality Detection of Mammograms by Discriminative Dictionary learning on DSIFT Descriptors. IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Farzaneh N, Habbo-Gavin S, Soroushmehr S.M.R, Patel H, Fessell D, Ward K, Najarian K.  2017.  Atlas based 3D liver segmentation using adaptive thresholding and superpixel approaches. IEEE International Conference on Acoustics, Speech and Signal Processing.
Farzaneh N, Soroushmehr S.M.R, Williamson C, Jiang C, Srinivasan A, Bapuraj JRajiv, Ward K, Korley FK, Najarian K.  2017.  Automated Subdural Hematoma Segmentation for Traumatic Brain Injured (TBI) Patients. IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Li Z, Soroushmehr S.M.R, Hua Y, Mao M, Qiu Y, Najarian K.  2017.  Classifying Osteosarcoma Patients Using Machine Learning Approaches. to be presented in IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Molaei S, Horan K, Nallamothu B, Kahrobaei D, Shiri M, Najarian K.  2017.  Deep Convolutional Neural Networks for Left Ventricle Segmentation. to be presented in IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Nejati M, Karimi M, Soroushmehr S.M.R, Karimi N, Samavi S, Najarian K.  2017.  Fast Exposure Fusion Using Exposedness Function. IEEE International Conference on Image Processing (ICIP’2017).
Gunaratne P, Ebe K, Horan K, Najarian K, Soroushmehr S.M.R.  2017.  Feasibility Study for In-Vehicle Detection of Severe Cardiac Events. to appear in FAST-zero symposia.
Ansari S, Molaei S, Oldham K, Heung M, Ward KR, Najarian K.  2017.  A Kalman Filter Approach with State Inequality Constraints for Real-time Prediction of Intradialytic Hypotension using a Polyvinylidene Fluoride Based Sensor. to be presented in IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Zare F., Ansari S., Najarian K., Nabavi S..  2017.  Noise cancellation for robust copy number variation detection using next generation sequencing data. Bioinformatics and Biomedicine (BIBM).
2016
Jafari MH, Samavi S, Karimi N, Ward K, Najarian K.  2016.  Automatic detection of melanoma using broad extraction of features from digital images. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Kadkhodaei M, Samavi S, Karimi N, Mohaghegh H, Soroushmehr SMR, Ward K, All A, Najarian K.  2016.  Automatic segmentation of multimodal brain tumor images based on classification of super-voxels. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Nejati M, Samavi S, Karimi N, Soroushmehr SMReza, Najar K,.  2016.  Boosted multi-scale dictionaries for image compression. 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Nejati M, Samavi S, Soroushmehr SMReza, Najar K,.  2016.  Coherence regularized dictionary learning. 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Mohaghegh H, Samavi S, Karimi N, Soroushmehr SMR, Najarian K.  2016.  Depth estimation from single images using modified stacked generalization. 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Khorsandi MA, Karimi N, Samavi S, Hajabdollahi M, Soroushmehr SMR, Ward K, Najarian K.  2016.  Hardware image assessment for wireless endoscopy capsules. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Farzaneh N, Samavi S, Soroushmehr SMReza, Patel H, Habbo-Gavin S, Fessell DPaul, Ward KR, Najarian K.  2016.  Liver segmentation using location and intensity probabilistic atlases. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Molaei S, Korley FK, Soroushmehr SMReza, Falk H, Sair H, Ward K, Najarian K.  2016.  A machine learning based approach for identifying traumatic brain injury patients for whom a head CT scan can be avoided. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Nasr-Esfahani E, Samavi S, Karimi N, Soroushmehr SMR, Jafari MH, Ward K, Najarian K.  2016.  Melanoma detection by analysis of clinical images using convolutional neural network. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Soroushmehr S.M.Reza, Bafna A, Sinha S, Nallamothu B, Ward KR, Najarian K.  2016.  Quantitative Measurement of Vasculature in Coronary Angiogram Videos. IEEE Biomedical Health Informatics Conference.
M. Khorsandi A, Karimi N, Soroushmehr S.M.Reza, Hajabdollahi M, Samavi S, Ward K, Najarian K.  2016.  Radon Transform Inspired Method for Hand Gesture Recognition. International Conference on Pattern Recognition (ICPR).
Ansari S, Farzaneh N, Heung M, Oldham K, Derksen H, Najarian K.  2016.  Real-time Detection of Intradialytic Hypotension using a Novel Polyvinylidene Fluoride Based Sensor. IEEE Biomedical Health Informatics Conference.
HosseinKhani Z, Karimi N, Soroushmehr S.M.Reza, Hajabdollahi M, Samavi S, Ward K, Najarian K.  2016.  Real-Time Removal of Random Value Impulse Noise in Medical Images. International Conference on Pattern Recognition (ICPR).
Jamali M, Samavi S, Karimi N, Soroushmehr SMR, Ward K, Najarian K.  2016.  Robust watermarking in non-ROI of medical images based on DCT-DWT. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Jafari MH, Samavi S, Soroushmehr SMR, Mohaghegh H, Karimi N, Najarian K.  2016.  Set of descriptors for skin cancer diagnosis using non-dermoscopic color images. Image Processing (ICIP), 2016 IEEE International Conference on.
Mohaghegh H, Karimi N, Soroushmehr S.M.Reza, Samavi S, Najarian K.  2016.  Single Image Depth Estimation Using Joint Local-Global Features. International Conference on Pattern Recognition (ICPR).
Jafari MH, Karimi N, Nasr-Esfahani E, Samavi S, Soroushmehr SMR, Ward K, Najarian K.  2016.  Skin Lesion Segmentation in Clinical Images Using Deep Learning. Pattern Recognition (ICPR), 2016 23rd International Conference on.
Nasr-Esfahani E, Samavi S, Karimi N, Soroushmehr SMR, Ward K, Jafari MH, Felfeliyan B, Nallamothu B, Najarian K.  2016.  Vessel extraction in X-ray angiograms using deep learning. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Felfelian B, Fazlali HR, Karimi N, Soroushmehr SMR, Samavi S, Nallamothu B, Najarian K.  2016.  Vessel segmentation in low contrast X-ray angiogram images. Image Processing (ICIP), 2016 IEEE International Conference on.
2015
Mohaghegh H, Karimi N, Soroushmehr SMR, Samavi S, Najarian K.  2015.  Adaptive stereo medical image watermarking using non-corresponding blocks. Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE.
Kazeminia S, Karimi N, Mirmahboub B, Soroushmehr SMR, Samavi S, Najarian K.  2015.  Bone extraction in X-ray images by analysis of line fluctuations. Image Processing (ICIP), 2015 IEEE International Conference on.
Soroushmehr SMR, Bafna A, Schlosser S, Ward K, Derksen H, Najarian K.  2015.  CT image segmentation in traumatic brain injury. 2015 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC).
Nejati M, Samavi S, Soroushmehr SM, Najarian K.  2015.  Low-rank regularized collaborative filtering for image denoising. Image Processing (ICIP), 2015 IEEE International Conference on.
Ansari S, Belle A, Najarian K.  2015.  Multi-modal integrated approach towards reducing false arrhythmia alarms during continuous patient monitoring: The Physionet Challenge 2015. Computing in Cardiology Conference (CinC), 2015.
Kazeminia S, Karimi N, Soroushmehr SMR, Samavi S, Derksen H, Najarian K.  2015.  Region of interest extraction for lossless compression of bone X-ray images. Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE.
Fazlali HR, Karimi N, Soroushmehr SMR, Samavi S, Nallamothu B, Derksen H, Najarian K.  2015.  Robust catheter identification and tracking in X-ray angiographic sequences. Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE.
Fazlali HR, Karimi N, Soroushmehr SMR, Sinha S, Samavi S, Nallamothu B, Najarian K.  2015.  Vessel region detection in coronary X-ray angiograms. Image Processing (ICIP), 2015 IEEE International Conference on.
2014
Ghaedi L, Gottlieb R, Sarrett D, ismail amid, Belle A, Najarian K.  2014.  An Automated Dental Caries Detection and Scoring System for Optical Images of Tooth Occlusal Surface. IEEE Engieering in Medicine and Biology Society Conference.
Razi A, Afghah F, Belle A, Ward K, Najarian K.  2014.  Blood Loss Severity Prediction using Game Theoretic Based Feature Selection. International Conferences on Biomedical and Health Informatics (BHI), IEEE Engineering in Medicine and Biology Society (EMBS).
Dehghannasiri R, Soroushmehr S.MReza, Shirani S.  2014.  FRAME RATE UP-CONVERSION USING NONPARAMETRIC ESTIMATOR. IEEE International Conference on Image Processing (ICIP).
2013
Qi X, Belle A, Shandilya S, Najarian K, Hargraves RSHobson, Cockrell C, Tang Y, Ward K.  2013.  Automated Analysis of CT Slices for Detection of Ideal Midline from Brain CT Scans. International Multi-Conference on Computing in the Global Information Technology (ICCGI).
Xuguang Q, Belle A, Shandilya S., Najarian K., Chen W, Hargraves R.S.H., Cockrell C.  2013.  Automated Intracranial Pressure Prediction Using Multiple Features Sources. IEEE International Conference on Information Science and Applications (ICISA).
2012
Belle A, Pfaffenberger M, Hargraves R.H, Najarian K.  2012.  An Automated Decision Making System for Detecting Loss of Attention In Individuals Using Real Time Processing of Electroencephalogram. VII International Workshop on Biosignal Interpretation .
Davuluri P, Wu J, Belle A, Tang Y., Cockrell C., Ward K., Hargraves R., Najarian K..  2012.  An Image Processing And Machine Learning Based Computer-Aided Decision Support For Traumatic Pelvic Injuries. Proceedings of VII International Workshop on Biosignal Interpretation .

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