Biomedical & Clinical Informatics Lab

Department of Computational Medicine & Bioinformatics

Publications

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2017
Tavakoli N, Karimi M, Nejati M, Karimi N, Soroushmehr S.M.R, Samavi S, Najarian K.  2017.  Abnormality Detection of Mammograms by Discriminative Dictionary learning on DSIFT Descriptors. IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Mohaghegh H, Karimi N, Samavi S, Najarian K.  2017.  Aggregation of Rich Depth Aware Features in a Multi -Level Learning Model for Single Image Depth Estimation. Submitted to IEEE Transactions on Circuits and Systems for Video Technology.
Kratz A., Ansari S., Duda M., Chen X., Murphy J., Bay E., Williams D., Clauw D., Najarian K.  2017.  Ambulatory heart rate variability identifies differences in sleep between people with fibromyalgia and matched controls. The Journal of Pain. 18:S54.
Farzaneh N, Habbo-Gavin S, Soroushmehr S.M.R, Patel H, Fessell D, Ward K, Najarian K.  2017.  Atlas based 3D liver segmentation using adaptive thresholding and superpixel approaches. IEEE International Conference on Acoustics, Speech and Signal Processing.
Yao H, Soroushmehr S.M.R, Williamson CA, Ward KR, Farzaneh N, Najarian K.  2017.  Automated Decision Support System to Detect and Evaluate the Hematoma in Patients with Acute Traumatic Brain Injury.
Farzaneh N, Soroushmehr S.M.R, Williamson CA, Jiang C, Srinivasan A, Bapuraj JR, Yao H, Ward KR, Korley F, Najarian K.  2017.  Automated Decision Support System to Quantitatively Evaluate the Volume of Subdural Hematoma in Traumatic Brain Injured Patients.
Farzaneh N, Soroushmehr S.M.R, Williamson C, Jiang C, Srinivasan A, Bapuraj JRajiv, Ward K, Korley FK, Najarian K.  2017.  Automated Subdural Hematoma Segmentation for Traumatic Brain Injured (TBI) Patients. IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Karimi M, Nejati M, Samavi S, Karimi N, Najarian K.  2017.  Blind Stereo Quality Assessment Based on Learned Features from Binocular Combined Images. IEEE Transactions on Multimedia. :1–1.
Li Z, Soroushmehr S.M.R, Hua Y, Mao M, Qiu Y, Najarian K.  2017.  Classifying Osteosarcoma Patients Using Machine Learning Approaches. to be presented in IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Molaei S, Horan K, Nallamothu B, Kahrobaei D, Shiri M, Najarian K.  2017.  Deep Convolutional Neural Networks for Left Ventricle Segmentation. to be presented in IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Farzaneh N, Soroushmehr S.M.R, Williamson CA, Srinivasan A, Bapuraj JR, Yao H, Ward KR, Najarian K.  2017.  Developing an Automated System to Predict ICU Length of Stay for TBI patients with Subdural Hematoma.
Wang L, Ansari S, Najarian K, Ward K, Oldham K.  2017.  Estimation of Peripheral Artery Radius using Non-Invasive Sensors and Kalman Filtering of Local Dynamics. submitted to American Control Conference.
Jafari MH, Nasr-Esfahani E, Karimi N, Samavi S, Najarian K.  2017.  Extraction of skin lesions from non-dermoscopic images for surgical excision of melanoma. International Journal of Computer Assisted Radiology and Surgery.
Nejati M, Karimi M, Soroushmehr S.M.R, Karimi N, Samavi S, Najarian K.  2017.  Fast Exposure Fusion Using Exposedness Function. IEEE International Conference on Image Processing (ICIP’2017).
Kratz A., Ansari S., Duda M., Chen X., Murphy J., Williams D., Najarian K., Clauw D.  2017.  Feasibility of the E4 Wristband to assess sleep in adults with and without fibromyalgia. The Journal of Pain. 18:S54.
Gunaratne P, Ebe K, Horan K, Najarian K, Soroushmehr S.M.R.  2017.  Feasibility Study for In-Vehicle Detection of Severe Cardiac Events. to appear in FAST-zero symposia.
Hajabdolahi M, Karimi N, Shirani S, Samavi S, Najarian K.  2017.  Hardware Implementation of Adaptive Watermarking Based on Local Spatial Disorder Analysis. submitted to Circuits, Systems, and Signal Processing, Springer.
Ansari S, Molaei S, Oldham K, Heung M, Ward KR, Najarian K.  2017.  A Kalman Filter Approach with State Inequality Constraints for Real-time Prediction of Intradialytic Hypotension using a Polyvinylidene Fluoride Based Sensor. to be presented in IEEE Engineering in Medicine and Biology Society conference (EMBC'17).
Wang L, Ansari S, Slavin D, Najarian K, Ward K, Oldham K.  2017.  Non-Invasive Vascular Resistance Monitoring with a Piezoelectric Sensor and Pulse Plethysmograph. submitted to Sensors & Actuators.
Etemad E, Samavi S, Soroushmehr SMReza, Karimi N, Etemad M, Shirani S, Najarian K.  2017.  Robust image watermarking scheme using bit-plane of hadamard coefficients. Multimedia Tools and Applications. :1–23.
Nejati M, Samavi S, Karimi N, Soroushmehr S.M.R, Shirani S, Najarian K.  2017.  Surface area-based focus criterion for multi-focus image fusion. Information Fusion.
Fazlali H.R, Soroushmehr S.M.R, Samavi S, Nallamothu BK, Najarian K.  2017.  Vessel Segmentation and Catheter Detection in X-Ray Angiograms Using Superpixels. submitted to Expert Systems with Applications, Elsevier.
Biwer C, Rothberg A, IglayReger H, Derksen H, Burant CF, Najarian K.  2017.  Windowed persistent homology: A topological signal processing algorithm applied to clinical obesity data. PLOS ONE. 12:e0177696.
2016
Jafari MH, Samavi S, Karimi N, Ward K, Najarian K.  2016.  Automatic detection of melanoma using broad extraction of features from digital images. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Kadkhodaei M, Samavi S, Karimi N, Mohaghegh H, Soroushmehr SMR, Ward K, All A, Najarian K.  2016.  Automatic segmentation of multimodal brain tumor images based on classification of super-voxels. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Nejati M, Samavi S, Karimi N, Najarian K.  2016.  Boosted Dictionary Learning for Image Compression. IEEE Transactions on Image Processing.
Nejati M, Samavi S, Karimi N, Soroushmehr SMReza, Najar K,.  2016.  Boosted multi-scale dictionaries for image compression. 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Nejati M, Samavi S, Soroushmehr SMReza, Najar K,.  2016.  Coherence regularized dictionary learning. 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Nejati M, Samavi S, Derksen H, Najarian K.  2016.  Denoising by Low-Rank and Sparse Representations. Journal of Visual Communication and Image Representation.
Mohaghegh H, Samavi S, Karimi N, Soroushmehr SMR, Najarian K.  2016.  Depth estimation from single images using modified stacked generalization. 2016 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP).
Heidari M, Samavi S, Soroushmehr SMR, Shirani S, Karimi N, Najarian K.  2016.  Framework for robust blind image watermarking based on classification of attacks. Multimedia Tools and Applications. :1–21.
Nasr-Esfahani E, Karimi N, Soroushmehr SM, M Jafari H, M Khorsandi A, Samavi S, Najarian K.  2016.  Hand Gesture Recognition for Contactless Device Control in Operating Rooms. arXiv preprint arXiv:1611.04138.
Khorsandi MA, Karimi N, Samavi S, Hajabdollahi M, Soroushmehr SMR, Ward K, Najarian K.  2016.  Hardware image assessment for wireless endoscopy capsules. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Shandilya S, Kurz MC, Ward KR, Najarian K.  2016.  Integration of Attributes from Non-Linear Characterization of Cardiovascular Time-Series for Prediction of Defibrillation Outcomes. PloS one. 11
Farzaneh N, Samavi S, Soroushmehr SMReza, Patel H, Habbo-Gavin S, Fessell DPaul, Ward KR, Najarian K.  2016.  Liver segmentation using location and intensity probabilistic atlases. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Soroushmehr S.M.R, Korely F, Williamson C, Ward K, Najarian K.  2016.  A Machine Learning Approach to Determine the Need for Head CT among Traumatic Brain Injury Patients.
Molaei S, Korley FK, Soroushmehr SMReza, Falk H, Sair H, Ward K, Najarian K.  2016.  A machine learning based approach for identifying traumatic brain injury patients for whom a head CT scan can be avoided. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Nasr-Esfahani E, Samavi S, Karimi N, Soroushmehr SMR, Jafari MH, Ward K, Najarian K.  2016.  Melanoma detection by analysis of clinical images using convolutional neural network. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Ansari S, Ward K, Najarian K.  2016.  Motion Artifact Suppression in Impedance Pneumography Signal for Portable Monitoring of Respiration: an Adaptive Approach.
Soroushmehr S.M.R, Williamson C, Korely F, Ward K, Najarian K.  2016.  Non-invasive estimation of intracranial pressure in traumatic brain injury (TBI).
Ansari S, Tiba MHakam, Oldham K, Ward KR, Najarian K.  2016.  Noninvasive Peripheral Vascular Resistance Measured by a Polyvinylidene Fluoride Sensor Identifies Patterns of Oxygen Debt Repayment During Resuscitation After Hemorrhage. :A19409.
Karimi M, Samavi S, Karimi N, Soroushmehr SMReza, Lin W, Najarian K.  2016.  Quality Assessment of Retargeted Images by Salient Region Deformity Analysis. Journal of Visual Communication and Image Representation.
Soroushmehr S.M.Reza, Farzaneh N, Korely F, Williamson C, Ward K, Najarian K.  2016.  Quantitative assessment of hematoma in traumatic brain injury (TBI).
Soroushmehr S.M.Reza, Bafna A, Sinha S, Nallamothu B, Ward KR, Najarian K.  2016.  Quantitative Measurement of Vasculature in Coronary Angiogram Videos. IEEE Biomedical Health Informatics Conference.
M. Khorsandi A, Karimi N, Soroushmehr S.M.Reza, Hajabdollahi M, Samavi S, Ward K, Najarian K.  2016.  Radon Transform Inspired Method for Hand Gesture Recognition. International Conference on Pattern Recognition (ICPR).
Ansari S, Farzaneh N, Heung M, Oldham K, Derksen H, Najarian K.  2016.  Real-time Detection of Intradialytic Hypotension using a Novel Polyvinylidene Fluoride Based Sensor. IEEE Biomedical Health Informatics Conference.
HosseinKhani Z, Karimi N, Soroushmehr S.M.Reza, Hajabdollahi M, Samavi S, Ward K, Najarian K.  2016.  Real-Time Removal of Random Value Impulse Noise in Medical Images. International Conference on Pattern Recognition (ICPR).
Jamali M, Samavi S, Karimi N, Soroushmehr SMR, Ward K, Najarian K.  2016.  Robust watermarking in non-ROI of medical images based on DCT-DWT. Engineering in Medicine and Biology Society (EMBC), 2016 IEEE 38th Annual International Conference of the.
Wu J, Hargraves RHobson, Najarian K, Belle A, Ward KR.  2016.  Segmentation and fracture detection in CT images.
Jafari MH, Samavi S, Soroushmehr SMR, Mohaghegh H, Karimi N, Najarian K.  2016.  Set of descriptors for skin cancer diagnosis using non-dermoscopic color images. Image Processing (ICIP), 2016 IEEE International Conference on.

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